Deconvolution
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Dear Listers,
I am a beginner in confocal microscopy and have a question concerning programs for image deconvolution. I would be very grateful if you could recommend me a program for confocal image deconvolution. Best regards, Hanna Sas Nowosielska |
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Dear Confocal friends,
I am a beginner in confocal microscopy and have a question concerning programs for confocal image deconvolution. I would be very grateful if you could help me. I would like to know what programs you find the best for beginners like me and which would you recommend me. Best regards, Hanna Sas Nowosielska |
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In reply to this post by Hanna_SN
Dear Hanna,
You can start with free ImageJ software and plugins FFTJ and DeconvolutionJ .
Arvydas
Arvydas Matiukas, Ph.D.
Director of Confocal&Two-Photon Imaging Core Facility Department of Pharmacology SUNY Upstate Medical University 766 Irving Ave., WH 3159 Syracuse, NY 13210 tel.: 315-464-7997 fax: 315-464-8014 email: [hidden email] Dear Listers,
I am a beginner in confocal microscopy and have a question concerning programs for image deconvolution. I would be very grateful if you could recommend me a program for confocal image deconvolution. Best regards, Hanna Sas Nowosielska |
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In reply to this post by Hanna_SN
Dear Dr. Nowosielska,
You posted a question on deconvolution software on the Confocal List. Scientific Volume Imaging (SVI) develops and distributes the Huygens deconvolution & analysis software. My response is therefore off-list. To give you the opportunity to work with deconvolution in an easy way I attach two open test-licenses for two of our software packages: Huygens Essential and Huygens Professional which you can download here: http://www.svi.nl/download. Download , License & User guidePlease find in the attachment your 10-day open test license for the Huygens Essential en Huygens Professional. I advise you to download the Huygens Essential User Guide and Huygens Professional User Guide. This helps you getting started with deconvolution quickly. I would recommend to first start testing with the Huygens Essential as this package will take you step by step through the deconvolution with lots of feedback.These licenses will function with the Huygens release you installed from our website http://www.svi.nl. To install the first license, launch Huygens Essential and click on 'Help' then 'License'. Paste the license, press 'Add' and 'OK.' Close the program and reopen it. Now the license is activated. Repeat that for the second license as they share one license folder. The license will be valid for 10 days from today onwards and includes the following options:
Support
With best regards, Arthur Kroon **************************************** Dr. Arthur Kroon Account manager Scientific Volume Imaging bv Building Laaperstaete Laapersveld 63 1213 VB Hilversum The Netherlands phone: ++ 31 35 6 42 16 26 Fax: ++ 31 35 6 83 79 71 ***************************************** Hanna Sas Nowosielska wrote:
Dear Dr. Mrs. Hanna Nowosielska, Your Huygens License String: HuEss-3.3-wcn-l64-BftvAC-de-2008Oct24-0-{[hidden email]}-2ac31b6fda8fea022800 If you need instructions on how to install it please refer to http://support.svi.nl/wiki/LicenseString. This license will entitle the user and his/her co-workers to access the private support side of the SVI-wiki, located at http://support.svi.nl/wiki/PrivateSupport. It also creates an account in the SIDB to upload images securely, see http://support.svi.nl/wiki/SendImagesToSvi. The access data is: username: [hidden email] password: e424 The access database is automatically updated twice a day. The public contents are always accessible at http://support.svi.nl/wiki Your support number: 44874. Please mention this number in all your support requests to SVI. Yours sincerely, Arthur Kroon Dear Dr. Mrs. Hanna Nowosielska, Your Huygens License String: HuPro-3.3-wcn-d2-BftvAC-de-2008Oct24-0-{[hidden email]}-79ed7acda80e04423e6d If you need instructions on how to install it please refer to http://support.svi.nl/wiki/LicenseString. This license will entitle the user and his/her co-workers to access the private support side of the SVI-wiki, located at http://support.svi.nl/wiki/PrivateSupport. It also creates an account in the SIDB to upload images securely, see http://support.svi.nl/wiki/SendImagesToSvi. The access data is: username: [hidden email] password: e424 The access database is automatically updated twice a day. The public contents are always accessible at http://support.svi.nl/wiki Your support number: 44874. Please mention this number in all your support requests to SVI. Yours sincerely, Arthur |
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In reply to this post by Hanna_SN
Dear Confocal List users,
By mistake an off-list email intended for Dr. Hanna Nowosielska was send to you all. I apologize for the fact that this happened at all. The licenses attached to that message have been disabled and Dr. Hanna Nowosielska will receive new licenses off-list. With best regards, **************************************** Arthur Kroon, PhD Account Manager Scientific Volume Imaging bv Building Laaperstaete Laapersveld 63 1213 VB Hilversum The Netherlands phone: ++ 31 35 6 46 82 16 Fax: ++ 31 35 6 83 79 71 ***************************************** Hanna Sas Nowosielska wrote:
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In reply to this post by Hanna_SN
For info on the industry standard, visit this link http://www.mediacy.com/index.aspx?page=AutoDeblurVisualize
where you can get a 30 day eval copy of AutoQuant.
David Barnes PhD.
On Mon, Oct 13, 2008 at 8:04 AM, Hanna Sas Nowosielska <[hidden email]> wrote:
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Please explain why your software is the industry standard? Ron Hoebe From: Confocal Microscopy
List [mailto:[hidden email]] On Behalf Of David Barnes For info on the industry standard, visit this link http://www.mediacy.com/index.aspx?page=AutoDeblurVisualize where you can get a 30 day eval copy of AutoQuant. David Barnes PhD. On Mon, Oct 13, 2008 at 8:04 AM, Hanna Sas Nowosielska <[hidden email]>
wrote: Dear Confocal friends,
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In reply to this post by David Barnes-2
It is not my software. I dont work for Mediacy.
On Wed, Oct 15, 2008 at 2:58 AM, Ron Hoebe <[hidden email]> wrote:
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Sudipta Maiti |
Fluorescence Conference and FCS workshop in India
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In reply to this post by Arthur Kroon
We are happy to announce Fluorescence 2009, an international conference on fluorescence applications to biology, from March 16 to 19, 2009, at the Tata Institute of Fundamental Research, Mumbai, India. The conference will have more than 100 participants, with some of the most well known scientists in the area contributing. The details of the conference can be found on the conference website (www.fluorescence2009.org). We invite you to submit abstracts for this conference. In addition, I wish to bring "FCS09" (www.fcsworkshop.in) to your
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