Good experience with microdissection for downstream RNA-seq sequencing?

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Avi Jacob Avi Jacob
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Good experience with microdissection for downstream RNA-seq sequencing?

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Hi all,

I am interested in hearing about successful RNA-seq from single cell(s)
dissection.
I know about PALM, Leica LMD (we just hosted a great demo) and I used the
first gen Arcturus years ago but I would appreciate some real-world
feedback about these systems with this specific application in mind.

Please PM me if you prefer.
Happy Holidays,
Avi

--
Avi Jacob, Ph.D.
Head of Light Microscopy
The Mina & Everard Goodman Faculty of Life Sciences
Bar-Ilan University, Ramat-Gan 5290002, Israel
Csúcs  Gábor-3 Csúcs Gábor-3
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Re: Good experience with microdissection for downstream RNA-seq sequencing?

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Dear Avi,

I would add to the instruments also the system of MMI (http://www.molecular-machines.com/home).  
        Concerning RNA-seq: We have currently a Zeiss-PALM system, with this single cell isolation and continuation of culturing it was possible and could be established with a moderate effort. I would expect the same from the MMI system. The Leica we didn't test so extensively as for us to have the system mounted on an inverted microscope (and hence use I also for other experiments) was also an important factor.

Greetings Gabor

P.S. And no commercial interest.

-----Original Message-----
From: Confocal Microscopy List [mailto:[hidden email]] On Behalf Of Avi Jacob
Sent: Thursday, December 14, 2017 8:47 AM
To: [hidden email]
Subject: Good experience with microdissection for downstream RNA-seq sequencing?

*****
To join, leave or search the confocal microscopy listserv, go to:
http://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
Post images on http://www.imgur.com and include the link in your posting.
*****

Hi all,

I am interested in hearing about successful RNA-seq from single cell(s) dissection.
I know about PALM, Leica LMD (we just hosted a great demo) and I used the first gen Arcturus years ago but I would appreciate some real-world feedback about these systems with this specific application in mind.

Please PM me if you prefer.
Happy Holidays,
Avi

--
Avi Jacob, Ph.D.
Head of Light Microscopy
The Mina & Everard Goodman Faculty of Life Sciences Bar-Ilan University, Ramat-Gan 5290002, Israel