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Dear Listers,
Harvard NeuroDiscovery Center Enhanced Neuroimaging Core will host an 3-day
ImageJ workshop in November. Detailed information is below.
Digital Image Analysis with ImageJ
November 13th – November 15th
This intensive 3-day workshop taught by Dr. Lai Ding, manager of the Harvard
NeuroDiscovery Center Enhanced Neuroimaging Core, introduces ImageJ, its
basic functions, and its macro programming capabilities. Using real imaging
projects performed at the Harvard NeuroDiscovery Center's Enhanced
Neuroimaging Core, Dr. Ding will demonstrate common image analysis tasks
such as basic image processing, stack alignment, cell counting and
measurement. Macro writing will be covered to demonstrate how to automate a
series of ImageJ commands, to process massive datasets automatically and to
store results as desired.
The workshop is broken down into three sessions. Interested participants can
sign up for one or more sessions depending on their interest and experience.
See tentative schedule below.
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Program Schedule:
Session I (November 13th) ImageJ for beginners: basic ImageJ functions,
measurement, filtering, background subtraction, cell counting, particle
analysis, and ethics on image processing.
Session II (November 14th) Advanced ImageJ: morphology filter, thresholding
methods, using ImageJ on FRAP, colocalization analysis and wound assay,
working with plugins, designing image analysis protocols.
Session III (November 15th) ImageJ Macro Programming: introduce ImageJ macro
programming language, record image process protocols as macro, batch process
multiple images, user interactive features in macro, case study with sample
codes. This session is aimed towards the non-programmer, however we do
expect the participant to have a basic idea of programming flow control
syntax ("for" loop, "if-else" control).
Location:
L2-025
Countway Library Computer Classroom
Harvard Medical School
10 Shattuck St. Boston, MA 02115
For further details including schedule details and enrollment information,
click
http://origin.library.constantcontact.com/download/get/file/1101734069002-155/ImageJ+worshop+revised+fall+2013.pdfTo register, please complete the online registration form by clicking
https://docs.google.com/spreadsheet/viewform?formkey=dDFuRTZGWDYyRVhXQXR1UjMybWhMV2c6MQFor further information please contact: Lai Ding at
[hidden email]
Best Regards
Lai Ding
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