OME and OMERO: Release of OMERO3.0-Beta2.3

[Jason Swedlow]

Search the CONFOCAL archive at http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal Hi-

The OME project is pleased to announce the release of OMERO3.0-Beta2.3.  OMERO3 is a Java Enterprise application designed for the management and visualization of digital microscopy data.  OMERO3 includes both server and client applications that install on most operating systems.  OMERO.server ships with a JBOSS Application Server, PostgreSQL RDMS, and uses three client applications: Java-based OMERO.insight and OMERO.importer, and a web browser-based OMERO.webadmin.

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Downloads
All OMERO resources are available at the OME software download page: http://openmicroscopy.org/downloads/

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Docs and Help
For new initiates, User Guides for OMERO client applications are included with the client packages.  Do have a look and forward any questions (see below).  (***NOTE: The User Guides are still for Beta2.2, Updates are coming***).

Screencast videos showing installation and use are at http://openmicroscopy.org/howto
(***NOTE:  these movies show the Beta2.2 clients and server.  There is new functionality, especially in the clients, in Beta-2.3 that is not yet shown-- we'll make new videos after the holidays. WE NEED A BREAK BADLY!***)

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OS X
OMERO.server installation on OS X is by Mac packages and should be automatic.  There are manual install instructions for Linux and OS X geeks.  (***NOTE:  Automatic package install on OS X 10.5 Leopard is not yet supported, but OMERO.server can be installed manually and run-- thanks to Steve Ogg for help on this).

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OMERO on Windows
We have always released OMERO clients for Windows; we now have tested OMERO.server on Windows! (Thanks to Carlos Neves for help on this!).  See https://trac.openmicroscopy.org.uk/omero/wiki/OmeroInstallWindows

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Upgrading the Database
PLEASE NOTE:  Upgrading an OMERO.server  to Beta-2.3 requires an update of the database.  See http://trac.openmicroscopy.org.uk/omero/wiki/OmeroUpgrade for more info.

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OMERO.server Upgrade notification
We've added our first automatic upgrade notification to OMERO.server .  More details, see http://trac.openmicroscopy.org.uk/omero/wiki/UpgradeCheck.  (***NOTE: this facility is on by default, but can be turned off; see the doc for more info).

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Feedback
Please let us know any problems, wishes etc.  In general, please use the ome-users mailing list-- for more info, see

http://openmicroscopy.org/getting-involved/

We have been using these applications in our lab for the last few weeks, so hopefully have most of the bugs.  If we've missed anything, do let us know.

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Summary

What's New in OMERO3-Beta2.3?

Just a very short summary of what's all detailed at:

http://trac.openmicroscopy.org.uk/omero/milestone/3.0-Beta2.3

and

http://trac.openmicroscopy.org.uk/shoola/milestone/3.0-Beta2.3

OMERO.server
-- a series of performance improvements to accelerate image rendering
-- fixed a RE memory leak issue
-- copying rendering settings
-- updates to LDAP support

OMERO.insight
-- user-settable image compression for improving performance at remote sites with limited bandwidth
-- Conversion of the Category Group/Category system to a Tagging system
-- New search functionality for Tags, Tag Sets, Annotations
-- Smart folders by Date
-- Change location of Prefs/Settings to ~/omero

OMERO.importer
-- Import history-- UI updates
-- Change location of Prefs/Settings to ~/omero

Happy imaging (and have a great holiday!)

Cheers,

Jason
 
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Wellcome Trust Centre for Gene Regulation & Expression
College of Life Sciences
MSI/WTB/JBC Complex
University of Dundee
Dow Street
Dundee  DD1 5EH
United Kingdom

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Lab Page: http://www.dundee.ac.uk/lifesciences/swedlow/
Open Microscopy Environment: http://openmicroscopy.org
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