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Re: not a confocal question - features of a widefield

Posted by Nuno Moreno on Dec 07, 2007; 6:17pm
URL: http://confocal-microscopy-list.275.s1.nabble.com/not-a-confocal-question-features-of-a-widefield-tp591195p591212.html

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Yes. In fact I just did it and I was wondering if there was some kind of
commercial solution to compare.

Even Deltavison what they do is having a switchable auto-focus that
exposes with low light before taking the "real" picture, which is not
adaptative. It might work better than mine because thinks are better
integrated but it is not more elegant :)

The adaptative exposure its so stupidly simple that I don't know why it
is not integrated the most of the well know software. Not IPP, metamorph
, Leica, Zeiss or Deltavision...as far has I know.

Maybe I have to sell it ;).

Regards,
NM



Zoltan Cseresnyes wrote:

> Search the CONFOCAL archive at
> http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
> I've been thinking about building a system like that ever since one of
> our users started doing overnight recordings and his samples sometimes
> drift vertically and thus would need an autofocus system to correct for
> that.  If you could tap into the Z-controller circuit of your system,
> you would be able to drive that with a signal that's proportional to the
> vertical drift.  The drift could be scaled with e.g. calculating average
> intensity during a Z-stack from a certain area of the image that's
> fairly thin.  Similar logic would work for the autoexposure as well.  
> Want to try it?
>  
> Zoltan
>
> On Dec 7, 2007 4:41 PM, Nuno Moreno <[hidden email]
> <mailto:[hidden email]>> wrote:
>
>     Search the CONFOCAL archive at
>     http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
>
>     Autoexpose will bleach everything, right?
>
>     Regarding the adaptative focus that I mentioned before, there are
>     commercial system that with minimum light and before an acquisition
>     "measure" the cell position and adapt the focus. But this is an half
>     adaptation. It could be that it does not need to readjust the focus.
>
>     What I was counting with would be after the acquisition, if it is out of
>     focus, it make the adjustment base in some kind of sensitivity
>     parameter. This could be after 10 time points but it might be that it
>     would never need such adjustment.
>
>
>     About the intensity variations I'm not talking about post processing
>     adjustments. If it gets saturated there are no post processing that can
>     help you.
>
>     Regards,
>     NM
>
>
>
>
>
>     Shalin Mehta wrote:
>      > Search the CONFOCAL archive at
>      > http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
>     <http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal> Dear Nuno,
>      >
>      >  Wouldn't auto-exposure on cameras suffice for maintaining constant
>      > intensity?
>      >
>      > Apparently most of the commercial adaptive optics systems are geared
>      > towards astronomy. Perhaps you have known this already:
>      > http://cfao.ucolick.org/
>      > Interesting to note that James Webb space telescope will have
>     hardware
>      > and intelligence for adaptive optics evolved from algorithms
>     developed
>      > for correcting aberrations for hubble telescope.
>      >
>      > Regards,
>      > Shalin
>      >
>      >
>      > On Dec 7, 2007 10:43 PM, Nuno Moreno <[hidden email]
>     <mailto:[hidden email]>
>      > <mailto:[hidden email]
>     <mailto:[hidden email]>>> wrote:
>      >
>      >     Search the CONFOCAL archive at
>      >     http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
>      >
>      >     Does anyone knows any commercial widefield SYSTEM that makes an
>      >     adaptative focus. And I mean adaptative (follows the cell.
>      >
>      >     The other feature is a commercial system that keeps
>     intensities, i.e.,
>      >     if you have something with different protein expression
>     levels over
>      >     time, the system will correct the exposure time so that at
>     the end the
>      >     intensities are constant.
>      >
>      >     Many thanks,
>      >     --
>      >     Nuno Moreno
>      >     Cell Imaging Unit
>      >     Instituto Gulbenkian de Ciência
>      >     http://uic.igc.gulbekian.pt <http://uic.igc.gulbekian.pt/>
>     <http://uic.igc.gulbekian.pt <http://uic.igc.gulbekian.pt/>>
>      >     http://www.igc.gulbekian.pt <http://www.igc.gulbekian.pt/>
>      >     phone +351 214464606
>      >     fax   +351 214407970
>      >
>      >
>      >
>      >
>      > --
>      > ~~~~~~~~~~~~~~~~~~~~~~~~~
>      > Shalin Mehta
>      > Graduate Student in Bioengineering, NUS
>      > mobile: +65-90694182
>      > blog: shalin.wordpress.com <http://shalin.wordpress.com/>
>     <http://shalin.wordpress.com <http://shalin.wordpress.com/>>
>      > ~~~~~~~~~~~~~~~~~~~~~~~~~~
>
>     --
>     Nuno Moreno
>     Cell Imaging Unit
>     Instituto Gulbenkian de Ciência
>     http://uic.igc.gulbekian.pt <http://uic.igc.gulbekian.pt/>
>     http://www.igc.gulbekian.pt <http://www.igc.gulbekian.pt/>
>     phone +351 214464606
>     fax   +351 214407970
>
>
>
>
> --
> --
> Zoltan Cseresnyes
> Facility manager, Imaging Suite
> Dept. of Zoology University of Cambridge
> Downing Street, Cambridge
> CB2 3EJ    UK
>
> Tel.: (++44) (0)1223 769282
> Fax.: (++44) (0)1223 336676

--
Nuno Moreno
Cell Imaging Unit
Instituto Gulbenkian de Ciência
http://uic.igc.gulbekian.pt
http://www.igc.gulbekian.pt
phone +351 214464606
fax   +351 214407970