Re: 3D reconstruction from serial sections

Posted by Cameron Nowell on
URL: http://confocal-microscopy-list.275.s1.nabble.com/3D-reconstruction-from-serial-sections-tp7557629p7557671.html

*****
To join, leave or search the confocal microscopy listserv, go to:
http://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
*****

Hi Manuel,

We use the registration plugins that can be found in Fiji (www.fiji.sc).

StackReg works quite well, you can find more info on it here

http://bigwww.epfl.ch/thevenaz/stackreg/


Cheers

Cam



Cameron J. Nowell
Microscopy Manager
Centre for Advanced Microscopy
Ludwig Institute for Cancer Research Melbourne - Parkville Branch
PO Box 2008
Royal Melbourne Hospital
Victoria, 3050
AUSTRALIA
Office: [phone]
Mobile: [phone]
Fax: [phone]
Facility Website
Linked In Profile





-----Original Message-----
From: Confocal Microscopy List [mailto:[hidden email]]
On Behalf Of Manuel Pele
Sent: Monday, 14 May 2012 1:14 PM
To: [hidden email]
Subject: 3D reconstruction from serial sections

*****
To join, leave or search the confocal microscopy listserv, go to:
http://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
*****

Hi everyone,

I'm looking for a way to reconstruct a full 3D image of my samples that
I need to image using serial sections. Any tips about which software I
can use ? Does it work well?

Cheers

Manuel

--
Manuel PELE, PhD

Australian Regenerative Medicine Institute, Building 75, Level 1 Monash
University, Clayton Campus Wellington Road Clayton, VIC 3800 AUSTRALIA

Ph: [phone]
Email: [hidden email]