Re: PSF measurement using Au beads

Posted by Lu Yan on
URL: http://confocal-microscopy-list.275.s1.nabble.com/PSF-measurement-using-Au-beads-tp7581962p7581964.html

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Hi Mike,

Thanks for your reply. Yes you are right those two layers are cover glass
and glass slide. I have seen in many papers people using gold beads to
probe the focal intensity distribution which somewhat related to the PSF of
the system, so I just figured it might be easier to measure in this way,
and i wanted to know if they had similar problems. But this distorted PSF
seems to be related to the fact that the incident beam has non perpect
Gaussian profile, which confuses me most.

Thanks,
Lu
On May 1, 2014 6:35 PM, "MODEL, MICHAEL" <[hidden email]> wrote:

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> Hi Lu,
>
> It seems to me that reflecting beads would be a tricky object to get PSF
> from because you have to deal with the angular dependence of scattering and
> reflection. 8 um might be the distance between a slide and a coverslip,
> both surfaces should reflect.
>
> Mike Model
>
> ________________________________________
> From: Confocal Microscopy List <[hidden email]> on
> behalf of Lu <[hidden email]>
> Sent: Thursday, May 01, 2014 5:49 PM
> To: [hidden email]
> Subject: PSF measurement using Au beads
>
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> Hello all,
>
> We have a home-build confocal microscopy setup in our lab, and we have been
> trying to evaluate the PSF using gold beads (d=150 nm), but currently we
> are
> having some difficulty on interpreting some of our results. I am hopeful
> that I could find some help here.
>
> Backgroud: Our excitation light is a 650 nm laser diode. Objective lens is
> Olympus 60X 1.35/Oil, and the illumination light from a single mode fiber
> is
> collimated using a Thorlabs achromatic doublet with focal length of 30 mm,
> and then sent into the objective by folding mirrors (the beam is slightly
> underfilling the back aperture of the objective). Piezo scanning is used
> instead of resonant mirrors scanning. We collect the reflected/scattered
> light from the bead to form image. No filter was used in front of our
> detector. For the beads sample, 99% Glycerol was used as mountant.
>
> Problems:
> 1. Two reflective layers showed up as we do axially scanning, separated by
> about 8 um, and the bead turned out to be attached to one of them. The
> axial
> PSF looks terribly distorted. It is very much like a four lobes pattern,
> i.e. an intensity null surrounded by 4 lobes on top/bottom and right/left.
> You could imagine that at some z positions, the lateral intensity pattern
> has a donut-shape. We do have a good explanation why this happened. Does
> any
> one ever have similar problem? Is my sample preparation wrong?
>
> 2. If I put a iris before the back aperture of the objective, and closed it
> a little bit to truncated my collimated beam to half of its original size,
> then the axial PSF suddenly got cleaned up, i.e. a single nice vertical
> lobe
> appeared. But 2 reflective layers were still there observable. Any idea
> why?
> We thought the achromatic double for collimation might induce some higher
> order free space mode other than pure Gaussian mode, such that when we
> close
> the iris we effectively cut off some high k vectors of those 'other modes',
> leaving nicer Gaussian going into the objective to produce nicer axial PSF.
> Does this make sense to you guys?
>
> 3. A question often confuses me, which exactly quantity, in my case, should
> I correlate my measured FWHM of the bead image, in order to check if my
> setup is of diffraction limited performance? I have not been able to find a
> consistent criteria in literatures.
>
> Thanks in advance.
> Lu
>