Andreas Bruckbauer |
Short pulses out of an IR laser broaden considerably when travelling through
dispersive medium, e.g. glass lenses and acoustic optic modulator of a multi-photon microscope. It is often claimed that shorter pulses broaden more than longer ones. Does anybody know good literature on this? You can compensate for this by negative prechirp, would the small difference in initial pulse width between the Spectra Physics and Coherent lasers have an effect after prechirp and passing through the microscope? |
Mayandi Sivaguru |
Andreas, I do not think it is the responsibility of the laser manufacturer to provide this data, as this data vary with what kind of optics you use. These measurements are typically done by Application Scientists of the microscope vendors using the lasers either from Spectra or Coherent. Perhaps you can directly contact the head of applications of respective scope manufacturer that whether they have ever measured these peak widths directly on the objectives (air, oil and water immersions) using autocorrelators and so on. For example, you can contact Renee Hessling, Head of Applications, Carl Zeiss, Jena for such data from Zeiss ([hidden email]). Shiv At 12:25 PM 9/26/2008, you wrote: Short pulses out of an IR laser broaden considerably when travelling through Microscopy Facility Manager 8, Institute for Genomic Biology University of Illinois at Urbana-Champaign 1206 West Gregory Dr. Urbana, IL 61801 USA Office: 217.333.1214 Fax: 217.244.2496 [hidden email] http://core.igb.uiuc.edu |
Periasamy, Ammasi (ap3t) |
I do not expect any company can provide these details and its
involved work. I know Dr. Warren Zipfel, David Wokosin and others measured these
parameters. You can visit the web site given below or talk to Warren http://www.drbio.cornell.edu/personnel/wrz2.html Hope this helps Ammasi Ammasi Periasamy, Ph.D. Director, Keck Center for
Cellular Imaging (KCCI) Professor of Biology and
Biomedical Engineering Biology, Gilmer Hall (064),
McCormick Rd University of Virginia Charlottesville, VA 22904 Voice: 434-243-7602 (Office);
982-4869 (lab) Fax:434-982-5210;
Email:[hidden email] http//:www.kcci.virginia.edu ************************ Workshop on FRET Microscopy,
March 3-7, 2009 http://www.kcci.virginia.edu/workshop/workshop2009/index.php ************************* From: Confocal Microscopy
List [mailto:[hidden email]] On Behalf Of Mayandi
Sivaguru
Short pulses out of an IR laser broaden considerably when
travelling through Mayandi Sivaguru, PhD, PhD |
Alison J. North |
In reply to this post by Mayandi Sivaguru
The Rockefeller University is seeking a qualified and motivated
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Adrian Smith-6 |
In reply to this post by Mayandi Sivaguru
On 27/09/2008, at 5:10 AM, Mayandi Sivaguru wrote: Andreas, I do not think it is the responsibility of the laser manufacturer to provide this data, as this data vary with what kind of optics you use. But that does not stop the laser manufacturers from using such concepts in the their sales pitch... which, (given I had exactly the same question about 2 years ago and never got a completely straight answer) is where I suspect the original poster is coming from :) Regards, Adrian |
Christian Soeller |
In reply to this post by Andreas Bruckbauer
I believe this topic came up before in one guise or another. I searched
the archives http://lists.umn.edu/cgi-bin/wa?A0=CONFOCALMICROSCOPY with the strings "chirp" or "pulse broadening" and got a number of hits. One of those contains reference to a paper by us on the question. My personal bottom line: with moderately long pulses (~120 fs) this does not tend to be much of an issue. If you go to short pulses (why?) and need extreme penetration depth you *might* consider it. The archived messages talk about prechirping setups. HTH Christian Andreas Bruckbauer wrote: > Short pulses out of an IR laser broaden considerably when travelling through > dispersive medium, e.g. glass lenses and acoustic optic modulator of a > multi-photon microscope. It is often claimed that shorter pulses broaden > more than longer ones. Does anybody know good literature on this? You can > compensate for this by negative prechirp, would the small difference in > initial pulse width between the Spectra Physics and Coherent lasers have an > effect after prechirp and passing through the microscope? > |
Warren Zipfel |
In reply to this post by Periasamy, Ammasi (ap3t)
The listserve rejected my PDF. It just had typical dispersion data
for a couple of "typical" MPM configs. If anyone wants it,
email me.
At 04:03 PM 9/26/2008, you wrote: I do not expect any company can provide these details and its involved work. I know Dr. Warren Zipfel, David Wokosin and others measured these parameters. You can visit the web site given below or talk to Warren |
In reply to this post by Andreas Bruckbauer
Hi Andreas,
You may want to read these articles: R.Wolleschensky1, T. Feurer1, R. Sauerbrey1, U. Simon2 "Characterization and optimization of a laser-scanning microscope in the femtosecond regime", Appl. Phys. B 67, 87–94 (1998) This paper descirbed how much GDD the microscope system gives. Jeffrey B. Guild, Chris Xu, and Watt W. Webb, "Measurement of group delay dispersion of high numerical aperture objective lenses using two-photon excited fluorescence",Vol. 36, No. 1 APPLIED OPTICS (1997) M. Mu¨ ller, J. Squier, R. Wolleschensky, U. Simon, G.J. Brakenhoff, J. Microsc.–Oxford 191 (1998) 141 This two papers measures the GDD of different objectives. The second paper shows how the performance can be improved when GDD is compensated. P. Xi, Y. Andegeko, L. R. Weisel, V. V. Lozovoy, M. Dantus, "Greater signal, increased depth, and less photobleaching in two-photon microscopy with 10 femtosecond pulses", Optics Communications 281(4), 1841-1849 (2008). This paper show how the TPM can be improved when both GDD and high-order dispersion is compensated. :) Thank you! Best, Peng Xi Head, Laboratory of Biomedical Imaging Institute for Laser Medicine and Biophotonics Shanghai Jiao Tong University 800 Dongchuan Rd. Shanghai 200240, China Tel: (86) 21-3420-4076 Email: [hidden email] http://biophotonics.sjtu.edu.cn/xipeng/ On Sat, Sep 27, 2008 at 1:25 AM, Andreas Bruckbauer <[hidden email]> wrote: Short pulses out of an IR laser broaden considerably when travelling through |
In reply to this post by Andreas Bruckbauer
Hi Andreas, R.Wolleschensky1, T. Feurer1, R. Sauerbrey1, U. Simon2 "Characterization and optimization of a laser-scanning microscope in the femtosecond regime", Appl. Phys. B 67, 87–94 (1998) Jeffrey B. Guild, Chris Xu, and Watt W. Webb, "Measurement of group delay dispersion of high numerical aperture objective lenses using two-photon excited fluorescence",Vol. 36, No. 1 APPLIED OPTICS (1997) M. Mu¨ ller, J. Squier, R. Wolleschensky, U. Simon, G.J. Brakenhoff, J. Microsc.–Oxford 191 (1998) 141 This two papers measures the GDD of different objectives. The second paper shows how the performance can be improved when GDD is compensated. P. Xi, Y. Andegeko, L. R. Weisel, V. V. Lozovoy, M. Dantus, "Greater signal, increased depth, and less photobleaching in two-photon microscopy with 10 femtosecond pulses", Optics Communications 281(4), 1841-1849 (2008). Thank you! Best, On Sat, Sep 27, 2008 at 1:25 AM, Andreas Bruckbauer <[hidden email]> wrote: Short pulses out of an IR laser broaden considerably when travelling through |
Warren Zipfel |
In reply to this post by Periasamy, Ammasi (ap3t)
The PDF I mentioned with some typical MPM dispersion data is on our
FTP site at:
ftp://ftp.ccmr.cornell.edu/pub/drbio/Dispersion/ I didn't realize the confocal listserve doesn't allow attachments. At 04:03 PM 9/26/2008, you wrote: I do not expect any company can provide these details and its involved work. I know Dr. Warren Zipfel, David Wokosin and others measured these parameters. You can visit the web site given below or talk to Warren |
Craig Brideau |
I'm actually working on a paper regarding this very topic. I'll be presenting it (if all goes well) at Photonics West this February. I'll be sure to make sure you folks know about it when it's complete. The short and sweet answer is that it completely depends on your microscope optics, and the laser companies tend to base their estimates on a 'typical' system. Understanding of what a typical system is though seems to be a bit spotty, which is why I'm going to try to generate some hard numbers on a variety of lasers and systems.
Craig On Sat, Sep 27, 2008 at 9:25 AM, Warren Zipfel <[hidden email]> wrote:
|
Andreas Bruckbauer |
In reply to this post by Andreas Bruckbauer
Thanks a lot for all who replied to my question on and off the list. It
seems that microscope and laser manufacturers now work closely together to optimize their systems. I came to the conclusion that the remark: "short pulses will broaden much more" is not relevant for systems with dispersion compensation like the current Olympus FV1000 or the MaiTai Deepsee or the new Coherent vision. These systems have enough compensation to achieve puls widths out of the objective which are very close to what comes out of the laser. But the initial difference (140 fs for the Coherent and 100 fs for the Spectra Physics MaiTai HP) remains. By detuning the dispersion compensation i can generate longer pulses on the system i am working with (MaiTai, Olympus FV1000 with Olympus pre-chirp), this indeed causes a loss in fluorescence intensity on a test sample. From this i conclude that the shorter pulses of the MaiTai can be an advantage. |
Craig Brideau |
Well you can never have pulses shorter than what you start out with. This means that the 100fs out of the MaiTai will be superior to the Chameleon's 140fs, IF YOU ARE USING DISPERSION CONTROL. If you are NOT using dispersion control then the Chameleon's 140fs will not broaden as much so you will have better performance. Bottom line is that pulse width is inversely proportional to dispersion sensitivity. If you are controlling dispersion with compensation then having short pulses out of the laser is a good thing since you can keep dispersion in check. Otherwise it will actually perform poorly. I'm hoping to make this a lot clearer (and backed up with some data) in my paper...
Craig On Mon, Sep 29, 2008 at 2:16 PM, Andreas Bruckbauer <[hidden email]> wrote: Thanks a lot for all who replied to my question on and off the list. It |
Sudipta Maiti |
That's not quite true, the pulses are not necessaily bandwidth limited
as they come out of the box. So after compressing, the 140fs pulse may become shorter than 100fs. For sure, Chameleon's predecessor (MIRA), had a chirped output that could be shortened. Sudipta On Mon, 29 Sep 2008, Craig Brideau wrote: > Well you can never have pulses shorter than what you start out with. This > means that the 100fs out of the MaiTai will be superior to the Chameleon's > 140fs, IF YOU ARE USING DISPERSION CONTROL. If you are NOT using dispersion > control then the Chameleon's 140fs will not broaden as much so you will have > better performance. Bottom line is that pulse width is inversely > proportional to dispersion sensitivity. If you are controlling dispersion > with compensation then having short pulses out of the laser is a good thing > since you can keep dispersion in check. Otherwise it will actually perform > poorly. I'm hoping to make this a lot clearer (and backed up with some > data) in my paper... > > Craig > > > On Mon, Sep 29, 2008 at 2:16 PM, Andreas Bruckbauer <[hidden email]>wrote: > >> Thanks a lot for all who replied to my question on and off the list. It >> seems that microscope and laser manufacturers now work closely together to >> optimize their systems. I came to the conclusion that the remark: "short >> pulses will broaden much more" is not relevant for systems with dispersion >> compensation like the current Olympus FV1000 or the MaiTai Deepsee or the >> new Coherent vision. These systems have enough compensation to achieve puls >> widths out of the objective which are very close to what comes out of the >> laser. But the initial difference (140 fs for the Coherent and 100 fs for >> the Spectra Physics MaiTai HP) remains. By detuning the dispersion >> compensation i can generate longer pulses on the system i am working with >> (MaiTai, Olympus FV1000 with Olympus pre-chirp), this indeed causes a loss >> in fluorescence intensity on a test sample. From this i conclude that the >> shorter pulses of the MaiTai can be an advantage. >> > -- Sudipta Maiti Dept. of Chemical Sciences Tata Institute of Fundamental Research Homi Bhabha Road, Colaba, Mumbai 400005, India 91-22-2278-2716 www.tifr.res.in/~biophotonics |
Craig Brideau |
Yes, you always have to base your assumptions on transform limited pulses. (transform limited = pulse is as short as possible for its bandwidth) Again I hope to get some measurements on all this very soon. Really, if you assume the availability of a compressor, that means the critical parameter out of an ultrafast laser is its bandwidth rather than its pulsewidth since pulsewidth can be manipulated but its very hard to add more bandwidth.
Thanks for bringing up that point! It's definitely something I will have to consider. Craig On Mon, Sep 29, 2008 at 9:53 PM, Sudipta Maiti <[hidden email]> wrote: That's not quite true, the pulses are not necessaily bandwidth limited as they come out of the box. So after compressing, the 140fs pulse may become shorter than 100fs. For sure, Chameleon's predecessor (MIRA), had a chirped output that could be shortened. |
There is some information on this from Spectra-Physics at Neuroscience...
|
Craig Brideau |
The ultra-broadband lasers just coming out like the one you mention REQUIRE dispersion control. There is so much spectral content in them that they disperse if you look at them funny. @:-) On the other hand you can get ~5-10fs pulses with these types of lasers.
Craig On Tue, Nov 18, 2008 at 3:57 AM, A Crane <[hidden email]> wrote: Would a system that offered a broader bandwidth be of interest then? |
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