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http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal I am tryring to view an eukaryotic cell infected with amoeba and I am using BacLight for the bacteria but it is also staining the cytoplasm of my amoeba green making it difficult to determine the location of the live bacteria. Can anyone recommend a dye that would be better or a dye that would stain the amoeba a different color other than green? The lasers I have to work with range from 457 to 639 so DAPI and Hoescht are out. Nicole Young |
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http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal Nicole - Are you looking at eukaryotic cells infected with amoebae AND you want to see bacteria in this sample as well? If so, my experience is that, at least for non-living eukaryotic cells, you should be able to see nuclei using the BacLight stain. The PI should show the nuclei and, if this isn't working, you could try acridine orange - we have even seen Syto 9 staining of nuclei in shed cheek epithelial cells (with pretty bacteria stuck all over them). However, anything you add besides the BacLight (including, for example, acridine orange) will stain your bacteria as well. Basically, I am surprised that you see no nuclear staining in a sample exposed to BacLight. If the "viability" part is of less importance than just seeing the bacteria, then acridine orange should work just fine for nuclei as well as bugs. >Search the CONFOCAL archive at >http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal > >I am tryring to view an eukaryotic cell infected with amoeba and I >am using BacLight for the bacteria but it is also staining the >cytoplasm of my amoeba green making it difficult to determine the >location of the live bacteria. Can anyone recommend a dye that >would be better or a dye that would stain the amoeba a different >color other than green? The lasers I have to work with range from >457 to 639 so DAPI and Hoescht are out. > >Nicole Young -- Robert J. Palmer Jr., Ph.D. Natl Inst Dental Craniofacial Res - Natl Insts Health Oral Infection and Immunity Branch Bldg 30, Room 310 30 Convent Drive Bethesda MD 20892 ph 301-594-0025 fax 301-402-0396 |
In reply to this post by Nicole Young
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http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal I suggest staining the amoebae with one of the cytoplasmic CellTracker dyes - probably CellTracker Orange CMTMR to give good spectral discrimination from the SYTO 9 (BacLight)dye. Also cutting the staining concentration or incubation time for the SYTO 9 dye will imnprove its discrimination of the bacteria over the amoebae. Full disclosure: SYTO 9 and CellTracker Orange CMTMR are Invitrogen/Molecular Probes products. Iain Johnson Invitrogen Corp. -----Original Message----- From: Confocal Microscopy List [mailto:[hidden email]] On Behalf Of Nicole Young Sent: Tuesday, March 18, 2008 11:31 AM To: [hidden email] Subject: dyes Search the CONFOCAL archive at http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal I am tryring to view an eukaryotic cell infected with amoeba and I am using BacLight for the bacteria but it is also staining the cytoplasm of my amoeba green making it difficult to determine the location of the live bacteria. Can anyone recommend a dye that would be better or a dye that would stain the amoeba a different color other than green? The lasers I have to work with range from 457 to 639 so DAPI and Hoescht are out. Nicole Young |
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